Time for another progress update!
I'm in the process of testing and working out the kinks on the I/O board, and it's getting pretty far in its series of tests.
The boot ROM actually does a decent bit of testing on the I/O board before it even puts up the "Testing..." screen, with only a relatively small amount of testing happening during the "I/O board test" that you actually see occurring after the RAM test completes. Once it gets through that initial I/O board test, it actually goes back and does some additional CPU board tests (this is what's happening when the CPU icon is highlighted on the Testing... screen) and this exposed a few more minor problems with the CPU board. Namely that the "write wrong parity" and vertical sync interrupt circuits weren't working right, but those have now been fixed and I think it's safe to say that the CPU board is fully-functional.
It also completes the long RAM test just fine (the one that you see on the Testing... screen), so that's some additional confirmation that memory addressing and parity checking is working fine!
As for the I/O board itself, both VIAs seem to be working flawlessly, and the COP seems to be executing code and putting out its ready signal like it's supposed to. The boot ROM isn't making it to the in-depth COP test yet (that's the very last test that it does on the I/O board), but the preliminary test at least looks good.
Communications with the SCC seem to work fine too, although the SCC core I found from the NanoMac project is insanely limited, to the point that it doesn't even support the internal loopback mode that the Lisa uses during the self-test. For now, I've just patched the loopback test out of the boot ROM, and I'll come back and improve the SCC core later. Reading and writing all the SCC registers seems to work great though!
The only two tests left in the I/O board phase of testing are the floppy controller and extended COP tests, and it's stuck on the floppy controller right now. Up until yesterday, the floppy controller was actually completely dead, but I've got it in a much better state now. It's now happy enough that it puts its ROM revision in the shared RAM for the 68000 to read, and the 68K reads the A8 just fine. And it seems to be able to address and control all the floppy drive control signals as well. I'm not 100% sure if the LS323/P6A PROM/LS174 state machine is working the way it's supposed to, but it at least seems to be running and doing something.
The current issue with the floppy controller is that it's failing its initial self-test, which the boot ROM notices when it reads the test results from the shared RAM, causing it to abort testing at that point. Luckily, I know why it's failing: for some reason, the floppy controller thinks a drive is connected, even though there isn't one, and so it tries to seek the heads back to track 0. But even after sending the seek command 80 times, the track 0 indicator bit still doesn't turn on (because there's no drive connected to turn it on), so the floppy controller thinks that either the drive or controller is defective and sets an error bit in the self-test result byte. So I just need to figure out why it thinks there's a drive connected when there's actually not.
After that, it's just the COP test, and then the I/O board should be done (aside from the SCC fix of course). The only thing left in the boot ROM's self-test after that is the scanning of the expansion slots for cards, but I don't have any cards "inserted", so it shouldn't detect anything and will hopefully just breeze through that test just fine.
At that point, we should be at the boot menu, where my next step will be getting a keyboard and mouse hooked up and interfacing with the COP so I can actually control things. I think I might try to hook up a USB keyboard and mouse, or PS/2 at the very least. And after that, I think connecting a ProFile would be a good idea. Not sure if this is even a thing, but if an ESP32 Verilog/VHDL core exists, I might even be able to integrate the functionality of ESProFile straight into the FPGA; no external drive or emulator needed!